ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 1004.00 38.90 2.00 100.0 MIR200CHG-202 lncRNA Peyer's patch (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 193.00 6.20 0.38 100.0 SNHG16-266 lncRNA Peyer's patch (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 547.00 17.58 1.09 100.0 SNHG16-266 lncRNA Peyer's patch (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 296.00 9.51 0.59 100.0 SNHG16-266 lncRNA Peyer's patch (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 77.00 26.64 0.15 100.0 NR2F2-AS1-327 lncRNA Peyer's patch (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 262.00 7.67 0.52 100.0 ENST00000747675 lncRNA Peyer's patch (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 94.00 2.75 0.19 37.15 ENST00000747675 lncRNA Peyer's patch (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 1332.00 39.02 2.65 100.0 ENST00000747675 lncRNA Peyer's patch (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 67.00 1.96 0.13 41.61 ENST00000747675 lncRNA Peyer's patch (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 92.00 2.69 0.18 49.46 ENST00000747675 lncRNA Peyer's patch (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 13924.00 26.27 27.72 100.0 SNHG26-250 lncRNA Peyer's patch (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 31952.00 60.28 63.62 91.04 SNHG26-250 lncRNA Peyer's patch (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 90.00 16.30 0.18 100.0 LINC02422-207 lncRNA Peyer's patch (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 53.00 8.29 0.11 100.0 ENST00000753088 lncRNA Peyer's patch (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 133.00 20.81 0.26 100.0 ENST00000753088 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 707.06 4.44 1.41 81.09 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 418.71 2.63 0.83 15.44 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 176.00 1.11 0.35 100.0 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 420.00 2.64 0.84 100.0 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 123.00 0.77 0.24 100.0 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 5065.54 31.83 10.09 59.15 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 3622.66 22.77 7.21 47.59 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 204.73 1.29 0.41 33.29 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 1593.17 10.01 3.17 76.37 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 35.00 7.14 0.07 100.0 ENST00000756452 lncRNA Peyer's patch (Tissue)