ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 1141.00 84.33 2.27 87.23 MIR155HG-205 lncRNA Peyer's patch (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 380.00 34.48 0.76 100.0 ENST00000786284 lncRNA Peyer's patch (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 14.00 1.27 0.03 63.64 ENST00000786284 lncRNA Peyer's patch (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 8.00 0.73 0.02 36.36 ENST00000786284 lncRNA Peyer's patch (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 3027.92 28.56 6.03 57.63 ENST00000797550 lncRNA Peyer's patch (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 3408.10 32.15 6.79 64.87 ENST00000797550 lncRNA Peyer's patch (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 2476.00 23.36 4.93 72.61 ENST00000797550 lncRNA Peyer's patch (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 70555.00 87.20 140.48 94.4 MIR181A1HG-212 lncRNA Peyer's patch (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 120.00 0.15 0.24 100.0 MIR181A1HG-212 lncRNA Peyer's patch (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 136.00 54.18 0.27 100.0 C19orf48P-218 lncRNA Peyer's patch (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 8269.00 75.25 16.46 93.52 SNHG18-220 lncRNA Peyer's patch (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 153.00 5.44 0.30 100.0 ENST00000817026 lncRNA Peyer's patch (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 23.85 0.33 0.05 40.42 ENST00000823279 lncRNA Peyer's patch (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 129.62 1.79 0.26 18.95 ENST00000823279 lncRNA Peyer's patch (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 643.88 8.87 1.28 25.24 ENST00000823279 lncRNA Peyer's patch (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 693.42 9.55 1.38 65.42 ENST00000823279 lncRNA Peyer's patch (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 151.00 2.08 0.30 75.88 ENST00000823279 lncRNA Peyer's patch (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 299.01 4.12 0.60 33.26 ENST00000823279 lncRNA Peyer's patch (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 2496.55 34.41 4.97 78.19 ENST00000823801 lncRNA Peyer's patch (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 265.00 63.70 0.53 86.32 ENST00000827714 lncRNA Peyer's patch (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 42.00 10.10 0.08 13.68 ENST00000827714 lncRNA Peyer's patch (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 7.00 0.02 0.01 100.0 GAS5-377 lncRNA Peyer's patch (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 367.00 1.06 0.73 100.0 GAS5-377 lncRNA Peyer's patch (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1240.00 3.57 2.47 100.0 GAS5-377 lncRNA Peyer's patch (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 31774.00 91.56 63.27 100.0 GAS5-377 lncRNA Peyer's patch (Tissue)