ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 314.00 1.56 0.63 67.09 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 372.00 1.84 0.74 95.14 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 86.00 0.43 0.17 100.0 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 638.00 3.16 1.27 60.08 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 32.00 0.16 0.06 100.0 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 1.00 0.00 0.00 100.0 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 91.00 0.45 0.18 100.0 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 4394.00 21.77 8.75 59.05 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 180.00 0.89 0.36 100.0 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 8893.00 44.07 17.71 79.05 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 6242.00 3.04 12.43 100.0 MIRLET7A1HG-203 lncRNA Peyer's patch (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 993.00 92.54 1.98 100.0 MEG8-225 lncRNA Peyer's patch (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 3871.00 41.76 7.71 100.0 SNHG29-232 lncRNA Peyer's patch (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 2352.00 25.37 4.68 100.0 SNHG29-232 lncRNA Peyer's patch (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 1222.00 13.18 2.43 100.0 SNHG29-232 lncRNA Peyer's patch (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 118.00 3.57 0.23 100.0 SNHG14-234 lncRNA Peyer's patch (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 9.00 0.27 0.02 100.0 SNHG14-234 lncRNA Peyer's patch (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 4393.00 33.13 8.75 100.0 ENST00000655317 lncRNA Peyer's patch (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 3234.00 24.39 6.44 97.79 ENST00000655317 lncRNA Peyer's patch (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 4396.00 0.67 8.75 94.93 LINC01962-202 lncRNA Peyer's patch (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 651250.00 98.91 1296.71 100.0 LINC01962-202 lncRNA Peyer's patch (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 282.00 0.04 0.56 100.0 LINC01962-202 lncRNA Peyer's patch (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 7987.00 88.77 15.90 100.0 MEG8-228 lncRNA Peyer's patch (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 390.00 11.91 0.78 100.0 LIMD1-AS1-204 lncRNA Peyer's patch (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 464.00 14.17 0.92 90.45 LIMD1-AS1-204 lncRNA Peyer's patch (Tissue)