ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 323.00 1.79 2.02 100.0 SNHG32-227 lncRNA testis (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 23.00 0.13 0.14 100.0 SNHG32-227 lncRNA testis (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 382.00 74.61 2.39 100.0 B4GALT1-203 nonsense mediated decay testis (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 386.00 9.70 2.42 100.0 ENST00000722183 lncRNA testis (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 232.00 5.83 1.45 73.42 ENST00000722183 lncRNA testis (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 109.00 2.74 0.68 100.0 ENST00000722183 lncRNA testis (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 114.00 35.29 0.71 100.0 MIR34BHG-202 lncRNA testis (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 1795.00 74.51 11.25 78.97 THBS3-AS1-228 lncRNA testis (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 691.00 22.81 4.33 100.0 SNHG16-266 lncRNA testis (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 250.00 8.25 1.57 100.0 SNHG16-266 lncRNA testis (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 321.00 10.60 2.01 100.0 SNHG16-266 lncRNA testis (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 2.00 25.00 0.01 100.0 MEG8-261 lncRNA testis (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 11.00 15.94 0.07 100.0 NR2F2-AS1-327 lncRNA testis (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 84.00 2.61 0.53 50.91 ENST00000747675 lncRNA testis (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 1138.00 35.41 7.13 100.0 ENST00000747675 lncRNA testis (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 49.00 1.52 0.31 36.84 ENST00000747675 lncRNA testis (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 32.00 1.00 0.20 27.59 ENST00000747675 lncRNA testis (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 453.00 14.09 2.84 100.0 ENST00000747675 lncRNA testis (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 13420.00 61.14 84.09 91.28 SNHG26-250 lncRNA testis (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 4687.00 21.36 29.37 100.0 SNHG26-250 lncRNA testis (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 78.00 18.48 0.49 100.0 LINC02422-207 lncRNA testis (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 86.00 6.09 0.54 100.0 ENST00000753088 lncRNA testis (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 23.00 1.63 0.14 100.0 ENST00000753088 lncRNA testis (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 375.39 4.44 2.35 88.54 ENST00000756336 lncRNA testis (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 922.19 10.91 5.78 64.81 ENST00000756336 lncRNA testis (Tissue)