ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 360.00 4.26 2.26 100.0 ENST00000756336 lncRNA testis (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 248.00 2.93 1.55 100.0 ENST00000756336 lncRNA testis (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 72.00 0.85 0.45 100.0 ENST00000756336 lncRNA testis (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 1197.41 14.16 7.50 43.32 ENST00000756336 lncRNA testis (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 1538.18 18.19 9.64 53.73 ENST00000756336 lncRNA testis (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 70.81 0.84 0.44 27.45 ENST00000756336 lncRNA testis (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 547.24 6.47 3.43 42.72 ENST00000756336 lncRNA testis (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 2.00 0.02 0.01 100.0 ENST00000756336 lncRNA testis (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 6.00 8.57 0.04 100.0 ENST00000756452 lncRNA testis (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 1059.00 52.58 6.64 100.0 ENST00000760093 lncRNA testis (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 211.00 10.48 1.32 100.0 ENST00000760093 lncRNA testis (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 769.00 16.36 4.82 81.12 LINC02806-241 lncRNA testis (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 12.00 0.26 0.08 100.0 LINC02806-241 lncRNA testis (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 1232.00 26.21 7.72 81.48 LINC02806-241 lncRNA testis (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 1395.00 97.55 8.74 100.0 EHBP1-AS1-210 lncRNA testis (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 169.00 37.31 1.06 100.0 ENST00000770398 lncRNA testis (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 134.00 29.58 0.84 100.0 ENST00000770398 lncRNA testis (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 12.00 2.65 0.08 100.0 ENST00000770398 lncRNA testis (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 257.00 11.78 1.61 100.0 ENST00000771298 lncRNA testis (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 9.00 0.41 0.06 100.0 ENST00000771298 lncRNA testis (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 795.00 36.43 4.98 94.64 ENST00000771298 lncRNA testis (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 48.00 2.20 0.30 100.0 ENST00000771298 lncRNA testis (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 40.00 3.50 0.25 100.0 ENST00000772672 lncRNA testis (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 74.00 26.62 0.46 100.0 ENST00000773843 lncRNA testis (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 286749.00 50.78 1796.73 91.9 SNHG12-223 lncRNA testis (Tissue)