ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 185.00 50.00 1.16 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 9.00 0.38 0.06 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 119736.00 98.27 750.25 99.91 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 6.00 0.22 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 595.00 21.47 3.73 86.86 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 55.00 32.93 0.34 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 7.00 1.89 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 59.00 5.09 0.37 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 20118.00 98.23 126.06 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 801.00 98.40 5.02 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 2083.00 20.16 13.05 88.53 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 182.00 1.76 1.14 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 8.00 0.01 0.05 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 2365.00 75.01 14.82 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 40.00 2.79 0.25 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 601.00 33.48 3.77 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 113.00 6.30 0.71 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 52.00 2.90 0.33 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 548.00 89.84 3.43 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA testis (Tissue)