ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 5382.00 53.77 33.72 86.67 ENST00000655317 lncRNA testis (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 434.00 6.83 2.72 94.14 LINC01962-202 lncRNA testis (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 4981.00 78.44 31.21 100.0 LINC01962-202 lncRNA testis (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 250.00 3.94 1.57 100.0 LINC01962-202 lncRNA testis (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 19322.00 93.05 121.07 100.0 MEG8-228 lncRNA testis (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 5.00 0.31 0.03 100.0 LIMD1-AS1-204 lncRNA testis (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 226.00 14.14 1.42 86.26 LIMD1-AS1-204 lncRNA testis (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 2401.00 55.17 15.04 87.09 MIR99AHG-262 lncRNA testis (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1060.00 24.36 6.64 100.0 MIR99AHG-262 lncRNA testis (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 17.00 53.12 0.11 89.47 MIR9-2HG-225 lncRNA testis (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 1514.00 47.17 9.49 100.0 MEG8-233 lncRNA testis (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 553.00 17.23 3.47 100.0 MEG8-233 lncRNA testis (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 3620.00 56.02 22.68 100.0 MEG8-234 lncRNA testis (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 851.00 13.17 5.33 100.0 MEG8-234 lncRNA testis (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 496.00 62.39 3.11 100.0 MEG8-240 lncRNA testis (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 42.00 21.43 0.26 100.0 SNHG14-306 lncRNA testis (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 503.00 13.26 3.15 100.0 ENST00000666735 lncRNA testis (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 56.00 1.48 0.35 100.0 ENST00000666735 lncRNA testis (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 7876.00 90.20 49.35 100.0 MEG8-242 lncRNA testis (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 505.00 0.24 3.16 100.0 MEG8-244 lncRNA testis (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 511.00 0.24 3.20 100.0 MEG8-244 lncRNA testis (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 207614.00 98.96 1300.88 99.94 MEG8-244 lncRNA testis (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 310.00 0.03 1.94 100.0 SNHG1-248 lncRNA testis (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 6.00 0.00 0.04 100.0 SNHG1-248 lncRNA testis (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 3430.00 0.32 21.49 98.96 SNHG1-248 lncRNA testis (Tissue)