ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 21.00 1.60 0.07 100.0 RNU5E-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 77.00 0.66 0.25 15.84 RNA5SP370-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 104.00 12.29 0.34 100.0 SNORA31-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 118.00 1.02 0.39 55.4 RNA5SP389-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 2178.00 18.80 7.18 100.0 RNA5SP389-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 40.00 0.35 0.13 100.0 RNA5SP389-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 152.00 1.31 0.50 26.53 RNA5SP389-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 51.00 0.14 0.17 100.0 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 4401.00 11.86 14.51 79.21 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 2436.00 6.57 8.03 71.0 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 5169.00 13.93 17.04 82.4 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1566.00 4.22 5.16 73.97 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 540.00 1.46 1.78 100.0 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 6248.00 16.84 20.60 87.14 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1134.00 3.06 3.74 44.73 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 984.55 2.65 3.25 62.27 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1611.00 4.34 5.31 66.13 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 1.00 0.00 0.00 100.0 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 235.29 0.63 0.78 48.31 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 277.03 0.75 0.91 68.07 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 840.35 2.27 2.77 39.1 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 1555.00 4.19 5.13 23.06 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 101.00 84.87 0.33 100.0 SNORD114-14-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 183.00 4.77 0.60 100.0 SNORD104-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 12.00 0.31 0.04 100.0 SNORD104-201 snoRNA esophagus squamous epithelium (Tissue)