ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 17887.00 77.04 58.96 96.09 MIR30D-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 2374.00 18.23 7.83 92.88 MIR126-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 10203.00 78.36 33.63 100.0 MIR126-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 73.00 35.78 0.24 100.0 MIR374A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 4354.00 82.01 14.35 100.0 MIR31-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 409.00 0.02 1.35 84.16 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 291.00 0.01 0.96 40.87 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 134.00 0.01 0.44 100.0 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 2973.00 0.15 9.80 60.61 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 111.00 0.01 0.37 100.0 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 3882.15 0.20 12.80 50.61 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 19888.00 1.02 65.56 87.25 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 2136.00 0.11 7.04 38.82 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 395.00 0.02 1.30 86.81 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 32.00 0.00 0.11 100.0 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 947.43 0.05 3.12 53.77 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 4361.70 0.22 14.38 47.75 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 548.00 0.03 1.81 50.37 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 3241.00 0.17 10.68 61.24 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 1357.25 0.07 4.47 48.72 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 1787.00 0.09 5.89 60.58 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 7302.00 0.37 24.07 88.57 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 1778665.00 90.99 5863.31 99.84 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 3378.00 0.17 11.14 86.22 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 61.00 14.19 0.20 100.0 Y_RNA.14-201 misc RNA esophagus squamous epithelium (Tissue)