ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 476.33 3.80 1.57 53.1 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 405.14 3.23 1.34 25.12 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 229.00 1.83 0.75 75.83 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 97.84 0.78 0.32 35.32 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 189.63 1.51 0.63 71.02 ENST00000823801 lncRNA esophagus squamous epithelium (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 506.00 65.37 1.67 79.06 ENST00000827714 lncRNA esophagus squamous epithelium (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 134.00 17.31 0.44 20.94 ENST00000827714 lncRNA esophagus squamous epithelium (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 17952.00 11.06 59.18 100.0 GAS5-377 lncRNA esophagus squamous epithelium (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 28.00 0.02 0.09 100.0 GAS5-377 lncRNA esophagus squamous epithelium (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1518.00 0.94 5.00 100.0 GAS5-377 lncRNA esophagus squamous epithelium (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 140376.00 86.50 462.75 100.0 GAS5-377 lncRNA esophagus squamous epithelium (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 45911.00 93.14 151.34 100.0 MIR205HG-245 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 163796.00 96.06 539.95 99.82 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 31.00 0.02 0.10 100.0 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 36.00 0.02 0.12 100.0 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 2374.00 1.39 7.83 100.0 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 3050.00 4.27 10.05 100.0 ZFAS1-242 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 66492.00 93.02 219.19 100.0 ZFAS1-242 lncRNA esophagus squamous epithelium (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 239.00 40.58 0.79 100.0 ENST00000837997 lncRNA esophagus squamous epithelium (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 178.00 30.22 0.59 100.0 ENST00000837997 lncRNA esophagus squamous epithelium (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 2177.00 66.86 7.18 75.62 ENST00000839036 lncRNA esophagus squamous epithelium (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 293.00 24.02 0.97 100.0 ENST00000849527 lncRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 12013.00 73.56 39.60 96.84 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 395.00 2.42 1.30 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 213.00 0.22 0.70 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA esophagus squamous epithelium (Tissue)