ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 190.95 0.01 0.63 36.72 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 2378.00 0.07 7.84 92.85 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 44.00 0.00 0.15 100.0 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 592.00 24.16 1.95 100.0 ENST00000778783 lncRNA esophagus squamous epithelium (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 1066.00 76.86 3.51 81.94 MIR155HG-205 lncRNA esophagus squamous epithelium (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 11.00 78.57 0.04 100.0 ENST00000784740 lncRNA esophagus squamous epithelium (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 94.00 1.73 0.31 100.0 ENST00000785178 lncRNA esophagus squamous epithelium (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 1012.00 9.32 3.34 91.92 ENST00000786284 lncRNA esophagus squamous epithelium (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 2687.00 24.73 8.86 100.0 ENST00000786284 lncRNA esophagus squamous epithelium (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 89.00 0.82 0.29 9.14 ENST00000786284 lncRNA esophagus squamous epithelium (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 5030.00 75.25 16.58 94.55 ENST00000788343 lncRNA esophagus squamous epithelium (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 2997.51 9.40 9.88 40.2 ENST00000797550 lncRNA esophagus squamous epithelium (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 2593.79 8.13 8.55 34.79 ENST00000797550 lncRNA esophagus squamous epithelium (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 21322.00 66.84 70.29 99.24 ENST00000797550 lncRNA esophagus squamous epithelium (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 40092.00 85.52 132.16 93.58 MIR181A1HG-212 lncRNA esophagus squamous epithelium (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 53.00 0.11 0.17 100.0 MIR181A1HG-212 lncRNA esophagus squamous epithelium (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 1058.00 28.14 3.49 100.0 C19orf48P-218 lncRNA esophagus squamous epithelium (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 1773.00 47.15 5.84 100.0 C19orf48P-218 lncRNA esophagus squamous epithelium (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 4555.00 74.99 15.02 88.76 SNHG18-220 lncRNA esophagus squamous epithelium (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 62.00 12.02 0.20 100.0 ENST00000817026 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 2867.00 22.87 9.45 98.62 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 53.00 0.42 0.17 100.0 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 263.10 2.10 0.87 42.5 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 801.12 6.39 2.64 68.24 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 181.00 1.44 0.60 100.0 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)