ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 272.00 0.52 0.90 100.0 SNHG16-266 lncRNA esophagus squamous epithelium (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 6.00 85.71 0.02 100.0 MEG8-261 lncRNA esophagus squamous epithelium (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 96.00 26.09 0.32 100.0 NR2F2-AS1-327 lncRNA esophagus squamous epithelium (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 286.00 1.07 0.94 37.88 ENST00000747675 lncRNA esophagus squamous epithelium (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 469.00 1.75 1.55 39.51 ENST00000747675 lncRNA esophagus squamous epithelium (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 19774.00 73.75 65.18 100.0 ENST00000747675 lncRNA esophagus squamous epithelium (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 432.00 1.61 1.42 47.95 ENST00000747675 lncRNA esophagus squamous epithelium (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 2190.00 8.17 7.22 100.0 ENST00000747675 lncRNA esophagus squamous epithelium (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 15054.00 56.46 49.63 97.83 SNHG26-250 lncRNA esophagus squamous epithelium (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 4043.00 15.16 13.33 69.02 SNHG26-250 lncRNA esophagus squamous epithelium (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 49.00 9.33 0.16 100.0 LINC02422-207 lncRNA esophagus squamous epithelium (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 138.00 5.00 0.45 100.0 ENST00000753088 lncRNA esophagus squamous epithelium (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 113.00 4.09 0.37 100.0 ENST00000753088 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 437.74 0.25 1.44 27.31 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 14550.00 8.38 47.96 100.0 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 1362.00 0.78 4.49 100.0 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 4302.00 2.48 14.18 100.0 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 988.46 0.57 3.26 24.22 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 3479.30 2.00 11.47 78.27 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 2275.19 1.31 7.50 29.89 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 636.94 0.37 2.10 61.96 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 126526.00 72.85 417.09 100.0 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 6607.82 3.80 21.78 71.09 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 17.00 8.54 0.06 100.0 ENST00000756452 lncRNA esophagus squamous epithelium (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 172.00 4.28 0.57 100.0 ENST00000760093 lncRNA esophagus squamous epithelium (Tissue)