ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 240.00 0.01 0.79 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 945.00 0.05 3.12 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 425.00 0.02 1.40 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 376.00 0.02 1.24 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 305.00 0.02 1.01 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 46686.00 2.42 153.90 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 314.00 0.02 1.04 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 536.00 0.03 1.77 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 111032.00 5.74 366.01 93.91 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 4.00 0.00 0.01 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 117070.00 6.06 385.92 97.13 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 28.00 0.00 0.09 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 10.00 0.00 0.03 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 6.00 0.00 0.02 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 13671.00 0.71 45.07 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 669.00 0.03 2.21 88.73 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 395.95 0.02 1.31 39.44 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 514.00 0.03 1.69 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 303.00 0.02 1.00 59.76 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 489.00 0.03 1.61 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 271.00 0.01 0.89 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 556.00 0.03 1.83 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 1466.00 28.06 4.83 100.0 SNHG14-315 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 1348.00 25.80 4.44 75.18 SNHG14-315 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 1002.00 19.18 3.30 68.82 SNHG14-315 lncRNA esophagus squamous epithelium (Tissue)