ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 39.00 50.65 0.13 100.0 MIR887-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 19.00 100.00 0.06 100.0 MIR889-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 3009.00 70.01 9.92 100.0 SNORD111-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 3502.00 56.81 11.54 75.85 SNORD88A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 80.00 94.12 0.26 100.0 MIR548K-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 286.00 71.50 0.94 100.0 MIR320B2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 97.00 95.10 0.32 100.0 MIR1271-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 194503.00 96.80 641.17 100.0 SNORD100-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2348.00 1.17 7.74 100.0 SNORD100-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 512.00 0.25 1.69 100.0 SNORD100-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 239.00 0.12 0.79 100.0 SNORD100-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 1660.00 61.16 5.47 100.0 SNORD111B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 122.00 5.70 0.40 100.0 RNU2-36P-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 189.00 8.82 0.62 100.0 RNU2-36P-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 181141.00 96.76 597.13 97.99 SNORD19C-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 567.00 0.30 1.87 100.0 SNORD19C-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 2047.00 0.74 6.75 100.0 SNORD12B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 255195.00 91.95 841.24 97.3 SNORD12B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 7934.00 2.86 26.15 100.0 SNORD12B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 6.00 1.52 0.02 100.0 Y_RNA.609-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 136.00 48.57 0.45 100.0 Y_RNA.612-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 471.00 0.70 1.55 100.0 SNORD71-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 84.00 0.13 0.28 100.0 SNORD71-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 65688.00 98.11 216.54 99.72 SNORD71-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1008.00 20.74 3.32 59.02 MIR194-2HG-201 lncRNA esophagus squamous epithelium (Tissue)