ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 12192.00 19.35 40.19 85.2 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 1107.00 1.76 3.65 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 14469.00 22.97 47.70 75.19 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 230.00 43.07 0.76 100.0 MT-TD-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 125.00 0.28 0.41 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 11160.00 25.04 36.79 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 26785.00 60.09 88.30 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 425.00 0.95 1.40 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 1365.00 12.56 4.50 83.69 MT-TS2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 1208.00 11.12 3.98 100.0 MT-TS2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 1671.00 15.38 5.51 100.0 MT-TS2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 344.00 11.91 1.13 100.0 MT-TL2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 864.00 0.33 2.85 88.34 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 114.00 0.04 0.38 13.09 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 5.00 0.00 0.02 100.0 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 219035.00 84.00 722.04 92.33 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 1786.00 0.68 5.89 100.0 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 859.00 0.33 2.83 100.0 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 3627.00 1.39 11.96 80.58 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 44.00 70.97 0.15 100.0 MIR196A1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 624.00 3.65 2.06 100.0 MT-RNR1-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 5589.00 32.66 18.42 100.0 MT-RNR1-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 204.00 75.00 0.67 100.0 MIR454-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 565.00 69.41 1.86 100.0 MIR501-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 706.00 91.33 2.33 100.0 MIR769-201 miRNA esophagus squamous epithelium (Tissue)