ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 2060.00 0.49 15.93 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 26199.00 6.29 202.58 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 412.00 0.10 3.19 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 74.00 1.00 0.57 100.0 FTX-219 lncRNA GM23338 (Cell line)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 5133.00 69.24 39.69 84.73 FTX-219 lncRNA GM23338 (Cell line)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 8831.00 10.33 68.28 36.19 CTC1-214 protein coding GM23338 (Cell line)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 3261.00 3.81 25.22 92.67 CTC1-214 protein coding GM23338 (Cell line)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 10232.00 11.97 79.12 79.32 CTC1-214 protein coding GM23338 (Cell line)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 15568.00 18.21 120.38 63.81 CTC1-214 protein coding GM23338 (Cell line)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 6032.00 7.06 46.64 77.31 CTC1-214 protein coding GM23338 (Cell line)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 3860.00 4.52 29.85 100.0 CTC1-214 protein coding GM23338 (Cell line)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 1909.00 2.23 14.76 100.0 CTC1-214 protein coding GM23338 (Cell line)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 1209.00 1.41 9.35 100.0 CTC1-214 protein coding GM23338 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 1511.00 3.87 11.68 80.5 ENST00000651540 lncRNA GM23338 (Cell line)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 228.00 0.58 1.76 99.56 ENST00000651540 lncRNA GM23338 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 62.00 0.16 0.48 100.0 ENST00000651540 lncRNA GM23338 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 931.00 2.38 7.20 65.2 ENST00000651540 lncRNA GM23338 (Cell line)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 19.00 0.05 0.15 100.0 ENST00000651540 lncRNA GM23338 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 21.00 0.05 0.16 100.0 ENST00000651540 lncRNA GM23338 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 995.00 2.55 7.69 100.0 ENST00000651540 lncRNA GM23338 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 75.00 0.19 0.58 100.0 ENST00000651540 lncRNA GM23338 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 118.00 0.30 0.91 100.0 ENST00000651540 lncRNA GM23338 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 4653.00 11.90 35.98 52.73 ENST00000651540 lncRNA GM23338 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 555.00 1.42 4.29 100.0 ENST00000651540 lncRNA GM23338 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 10932.00 27.96 84.53 38.66 ENST00000651540 lncRNA GM23338 (Cell line)