ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 6.00 0.13 0.05 100.0 MIRLET7A1HG-203 lncRNA GM23338 (Cell line)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 383678.00 97.46 2966.75 100.0 SNHG29-232 lncRNA GM23338 (Cell line)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 15.00 0.00 0.12 100.0 SNHG29-232 lncRNA GM23338 (Cell line)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 102.00 0.03 0.79 100.0 SNHG29-232 lncRNA GM23338 (Cell line)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 13.00 0.00 0.10 100.0 SNHG29-232 lncRNA GM23338 (Cell line)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 3586.00 0.91 27.73 100.0 SNHG29-232 lncRNA GM23338 (Cell line)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 1185.00 0.30 9.16 100.0 SNHG29-232 lncRNA GM23338 (Cell line)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 22.00 0.26 0.17 100.0 SNHG14-234 lncRNA GM23338 (Cell line)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 1377.00 16.01 10.65 98.71 SNHG14-234 lncRNA GM23338 (Cell line)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 205.00 2.38 1.59 100.0 SNHG14-234 lncRNA GM23338 (Cell line)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 235.00 2.73 1.82 100.0 SNHG14-234 lncRNA GM23338 (Cell line)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 808.00 9.40 6.25 100.0 SNHG14-234 lncRNA GM23338 (Cell line)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 692.00 8.05 5.35 99.86 SNHG14-234 lncRNA GM23338 (Cell line)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 248060.00 84.30 1918.10 99.56 ENST00000655317 lncRNA GM23338 (Cell line)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 16977.00 5.77 131.27 100.0 ENST00000655317 lncRNA GM23338 (Cell line)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 1966.00 0.67 15.20 0.76 ENST00000655317 lncRNA GM23338 (Cell line)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 191.00 0.06 1.48 100.0 ENST00000655317 lncRNA GM23338 (Cell line)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 311.00 3.72 2.40 43.25 LINC01962-202 lncRNA GM23338 (Cell line)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 1914.00 22.89 14.80 100.0 LINC01962-202 lncRNA GM23338 (Cell line)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 826.00 9.88 6.39 100.0 LINC01962-202 lncRNA GM23338 (Cell line)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 358.00 8.86 2.77 100.0 SNHG14-241 lncRNA GM23338 (Cell line)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 14.00 0.64 0.11 100.0 SNHG14-254 lncRNA GM23338 (Cell line)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 79.00 3.82 0.61 100.0 SNHG14-261 lncRNA GM23338 (Cell line)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 177.00 8.57 1.37 95.68 SNHG14-261 lncRNA GM23338 (Cell line)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 9.00 0.01 0.07 100.0 LIMD1-AS1-204 lncRNA GM23338 (Cell line)