ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 171.00 3.70 1.32 100.0 HSPA9-211 retained intron GM23338 (Cell line)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 3121.00 67.45 24.13 93.89 HSPA9-211 retained intron GM23338 (Cell line)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 90.00 97.83 0.70 100.0 DNM3OS-205 lncRNA GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 304.00 0.07 2.35 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 9.00 0.00 0.07 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 5830.00 1.40 45.08 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 4.00 0.00 0.03 5.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 2165.00 0.52 16.74 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 3159.00 0.76 24.43 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 159.00 0.04 1.23 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 405.00 0.10 3.13 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 175468.00 42.15 1356.79 98.49 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 2061.00 0.50 15.94 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 37301.00 8.96 288.43 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 19865.00 4.77 153.60 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 879.00 0.21 6.80 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 80728.00 19.39 624.22 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 9.00 0.00 0.07 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 95.00 0.02 0.73 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 5153.00 1.24 39.85 81.09 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 10377.00 2.49 80.24 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 963.00 0.23 7.45 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 554.00 0.13 4.28 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 11237.00 2.70 86.89 100.0 GAS5-230 retained intron GM23338 (Cell line)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 129.00 0.03 1.00 100.0 GAS5-230 retained intron GM23338 (Cell line)