ENCFF400GBK

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR587CPE
Description: Part of ENCODE experiment ENCSR587CPE. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 4082.00 80.88 20.14 84.74 MIR155HG-205 lncRNA spleen (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 94.00 2.97 0.46 100.0 ENST00000785178 lncRNA spleen (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 308.00 24.25 1.52 100.0 ENST00000786284 lncRNA spleen (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 60.00 4.72 0.30 75.0 ENST00000786284 lncRNA spleen (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 20.00 1.57 0.10 30.3 ENST00000786284 lncRNA spleen (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 2340.22 17.88 11.55 45.13 ENST00000797550 lncRNA spleen (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 2525.71 19.30 12.46 48.7 ENST00000797550 lncRNA spleen (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 3118.00 23.83 15.38 58.77 ENST00000797550 lncRNA spleen (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 138270.00 82.22 682.13 91.38 MIR181A1HG-212 lncRNA spleen (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 529.00 0.31 2.61 100.0 MIR181A1HG-212 lncRNA spleen (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 118.00 44.87 0.58 100.0 C19orf48P-218 lncRNA spleen (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 1030.00 51.29 5.08 88.79 SNHG18-220 lncRNA spleen (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 346.00 29.27 1.71 100.0 ENST00000817026 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 10867.44 48.60 53.61 74.8 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 419.78 1.88 2.07 26.96 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 388.85 1.74 1.92 2.75 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 211.00 0.94 1.04 77.29 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 30.00 0.13 0.15 100.0 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 614.87 2.75 3.03 4.37 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 318.96 1.43 1.57 52.46 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 1537.38 6.88 7.58 75.77 ENST00000823801 lncRNA spleen (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 217.00 60.61 1.07 74.83 ENST00000827714 lncRNA spleen (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 73.00 20.39 0.36 25.17 ENST00000827714 lncRNA spleen (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 450.00 0.97 2.22 100.0 GAS5-377 lncRNA spleen (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 21.00 0.05 0.10 100.0 GAS5-377 lncRNA spleen (Tissue)