ENCFF400GBK

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR587CPE
Description: Part of ENCODE experiment ENCSR587CPE. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 533.00 10.10 2.63 100.0 ENST00000760093 lncRNA spleen (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 7389.00 10.18 36.45 81.46 LINC02806-241 lncRNA spleen (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 151.00 0.21 0.74 100.0 LINC02806-241 lncRNA spleen (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 13.00 0.02 0.06 100.0 LINC02806-241 lncRNA spleen (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 57639.00 79.42 284.35 92.73 LINC02806-241 lncRNA spleen (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 780.00 91.23 3.85 100.0 EHBP1-AS1-210 lncRNA spleen (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 740.00 46.98 3.65 100.0 ENST00000770398 lncRNA spleen (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 92.00 5.84 0.45 100.0 ENST00000770398 lncRNA spleen (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 289.00 18.35 1.43 100.0 ENST00000770398 lncRNA spleen (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 7771.00 58.93 38.34 79.4 ENST00000771298 lncRNA spleen (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 286.00 2.17 1.41 100.0 ENST00000771298 lncRNA spleen (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 221.00 1.68 1.09 100.0 ENST00000771298 lncRNA spleen (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 583.00 4.42 2.88 100.0 ENST00000771298 lncRNA spleen (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 20.00 3.35 0.10 100.0 ENST00000772672 lncRNA spleen (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 552.00 28.45 2.72 100.0 ENST00000773843 lncRNA spleen (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 307344.00 29.61 1516.23 82.05 SNHG12-223 lncRNA spleen (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 726699.00 70.02 3585.04 98.85 SNHG12-223 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 8694.00 12.27 42.89 85.04 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 46580.00 65.75 229.79 100.0 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 277.00 0.39 1.37 65.64 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 736.00 1.04 3.63 100.0 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 967.17 1.37 4.77 47.86 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 640.91 0.90 3.16 42.61 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 1126.72 1.59 5.56 39.79 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 343.00 0.48 1.69 100.0 SNHG25-206 lncRNA spleen (Tissue)