ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 807.00 48.67 3.13 97.0 SNHG14-241 lncRNA transverse colon (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 4390.00 96.25 17.05 100.0 MEG8-228 lncRNA transverse colon (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 29.00 5.26 0.11 100.0 SNHG14-254 lncRNA transverse colon (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 26.00 3.10 0.10 100.0 SNHG14-261 lncRNA transverse colon (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 226.00 26.97 0.88 73.62 SNHG14-261 lncRNA transverse colon (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 32006.00 67.00 124.28 100.0 LIMD1-AS1-204 lncRNA transverse colon (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 511.00 1.07 1.98 100.0 LIMD1-AS1-204 lncRNA transverse colon (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 2854.00 5.97 11.08 96.0 LIMD1-AS1-204 lncRNA transverse colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 2736.00 68.08 10.62 87.69 MIR99AHG-262 lncRNA transverse colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 471.00 11.72 1.83 100.0 MIR99AHG-262 lncRNA transverse colon (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 14.00 53.85 0.05 100.0 SNHG14-270 lncRNA transverse colon (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 12.00 1.53 0.05 100.0 SNHG14-275 lncRNA transverse colon (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 108.00 73.97 0.42 89.26 MIR9-2HG-225 lncRNA transverse colon (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 395.00 55.32 1.53 100.0 MEG8-233 lncRNA transverse colon (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 42.00 5.88 0.16 100.0 MEG8-233 lncRNA transverse colon (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 25.00 6.70 0.10 100.0 SNHG14-278 lncRNA transverse colon (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 2.00 0.54 0.01 100.0 SNHG14-278 lncRNA transverse colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 134.00 25.77 0.52 100.0 MEG8-234 lncRNA transverse colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 68.00 13.08 0.26 100.0 MEG8-234 lncRNA transverse colon (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 2846.00 85.75 11.05 100.0 SNHG17-252 lncRNA transverse colon (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 351.00 16.04 1.36 66.1 SNHG14-288 lncRNA transverse colon (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 1561.00 71.34 6.06 93.03 SNHG14-288 lncRNA transverse colon (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 142.00 58.44 0.55 100.0 MEG8-240 lncRNA transverse colon (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 2.00 5.26 0.01 100.0 SNHG14-306 lncRNA transverse colon (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 17.00 44.74 0.07 100.0 SNHG14-306 lncRNA transverse colon (Tissue)