ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 465.00 72.09 1.81 100.0 HCN2-201 protein coding transverse colon (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 1.00 12.50 0.00 100.0 SLC49A4-201 protein coding transverse colon (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 85.00 13.54 0.33 100.0 ATP5MC3-201 protein coding transverse colon (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 369.00 91.79 1.43 100.0 CDC25A-201 protein coding transverse colon (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 265.00 46.74 1.03 100.0 RUNX3-201 protein coding transverse colon (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 173.00 53.89 0.67 100.0 BLOC1S4-201 protein coding transverse colon (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 929.00 13.80 3.61 100.0 ATAD5-201 protein coding transverse colon (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 111.00 5.84 0.43 100.0 SLITRK5-201 protein coding transverse colon (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 79.00 48.77 0.31 100.0 HASPIN-201 protein coding transverse colon (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 2320.00 98.89 9.01 100.0 ATG101-201 protein coding transverse colon (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 390.00 94.20 1.51 100.0 PRICKLE1-201 protein coding transverse colon (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 1743.00 95.82 6.77 97.59 MIR133A2-201 miRNA transverse colon (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 30.00 17.05 0.12 100.0 PBLD-204 protein coding transverse colon (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 95070.00 67.20 369.15 97.75 MIRLET7BHG-201 lncRNA transverse colon (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 36638.00 25.90 142.26 88.5 MIRLET7BHG-201 lncRNA transverse colon (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 2223.00 1.20 8.63 37.81 MIR375-201 miRNA transverse colon (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 180832.00 97.68 702.17 99.08 MIR375-201 miRNA transverse colon (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 3283.00 19.78 12.75 100.0 MIR30E-201 miRNA transverse colon (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 12604.00 75.93 48.94 100.0 MIR30E-201 miRNA transverse colon (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 619.00 49.64 2.40 100.0 MIR29A-201 miRNA transverse colon (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 508.00 86.54 1.97 100.0 MIR345-201 miRNA transverse colon (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 8304.00 98.68 32.24 100.0 MIR16-2-201 miRNA transverse colon (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 2.00 0.14 0.01 100.0 MIR340-201 miRNA transverse colon (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 1445.00 97.64 5.61 100.0 MIR340-201 miRNA transverse colon (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 1937.00 59.27 7.52 100.0 MIR107-201 miRNA transverse colon (Tissue)