ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 111.00 4.24 0.43 100.0 ENST00000666735 lncRNA transverse colon (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 283.00 10.80 1.10 100.0 ENST00000666735 lncRNA transverse colon (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 381.00 64.14 1.48 100.0 MEG8-242 lncRNA transverse colon (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 26.13 11.12 0.10 59.4 SNHG14-312 lncRNA transverse colon (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 14.87 6.33 0.06 33.79 SNHG14-312 lncRNA transverse colon (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 2.00 0.85 0.01 100.0 SNHG14-312 lncRNA transverse colon (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 67.00 0.12 0.26 100.0 MEG8-244 lncRNA transverse colon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 719.00 1.34 2.79 100.0 MEG8-244 lncRNA transverse colon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 52128.00 96.85 202.41 99.49 MEG8-244 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 3357.00 1.00 13.04 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 9407.00 2.79 36.53 98.11 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 465.30 0.14 1.81 49.5 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 502.00 0.15 1.95 87.92 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 14810.00 4.39 57.51 99.19 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 312.00 0.09 1.21 71.23 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 113021.00 33.50 438.86 99.57 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 21581.00 6.40 83.80 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 24377.00 7.23 94.66 99.52 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 84.00 0.02 0.33 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 122.00 0.04 0.47 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 2632.00 0.78 10.22 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 53.00 0.02 0.21 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 224.00 0.07 0.87 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 401.00 0.12 1.56 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 14656.00 4.34 56.91 100.0 SNHG1-248 lncRNA transverse colon (Tissue)