ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 11689.00 33.44 45.39 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 951.00 2.72 3.69 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 389.00 1.11 1.51 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 691.00 3.64 2.68 100.0 U2.6-201 snRNA transverse colon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 97.00 0.20 0.38 14.59 ENST00000619323 lncRNA transverse colon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 47978.00 96.74 186.30 98.11 ENST00000619323 lncRNA transverse colon (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 381.00 14.85 1.48 100.0 SCARNA4-202 scaRNA transverse colon (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 507.00 19.93 1.97 100.0 ENST00000625572 miRNA transverse colon (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 1165.00 75.50 4.52 100.0 ENST00000628177 snoRNA transverse colon (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 15667.00 94.90 60.83 100.0 ENST00000630615 snoRNA transverse colon (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 506.00 46.77 1.96 100.0 DMRT2-209 protein coding transverse colon (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 46.00 4.25 0.18 100.0 DMRT2-209 protein coding transverse colon (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 1322.00 42.70 5.13 100.0 SNORD98-201 snoRNA transverse colon (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 1098.00 35.47 4.26 100.0 SNORD98-201 snoRNA transverse colon (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 37184.41 46.21 144.39 50.67 MIR106AHG-201 lncRNA transverse colon (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 33.75 0.04 0.13 34.1 MIR106AHG-201 lncRNA transverse colon (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 4.00 0.00 0.02 100.0 MIR106AHG-201 lncRNA transverse colon (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 59.64 0.07 0.23 60.24 MIR106AHG-201 lncRNA transverse colon (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 139.00 28.19 0.54 100.0 MEG8-222 lncRNA transverse colon (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 47.00 9.53 0.18 100.0 MEG8-222 lncRNA transverse colon (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 1332.00 46.48 5.17 97.94 SNHG14-224 lncRNA transverse colon (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 43.00 1.50 0.17 76.79 SNHG14-224 lncRNA transverse colon (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 106.00 3.70 0.41 100.0 SNHG14-224 lncRNA transverse colon (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 5.00 0.17 0.02 100.0 SNHG14-224 lncRNA transverse colon (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 24.00 0.84 0.09 100.0 SNHG14-224 lncRNA transverse colon (Tissue)