ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 728.00 53.02 2.83 100.0 SNHG21-206 retained intron transverse colon (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 190.00 78.19 0.74 100.0 SNORD11B-201 snoRNA transverse colon (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 354.00 24.67 1.37 100.0 SNORD91B-201 snoRNA transverse colon (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 4860.00 44.80 18.87 61.44 SNORD91A-201 snoRNA transverse colon (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 10410.00 48.53 40.42 98.12 MIR486-1-201 miRNA transverse colon (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 13595.00 43.02 52.79 65.07 NOP56-219 retained intron transverse colon (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 351.00 1.11 1.36 100.0 NOP56-219 retained intron transverse colon (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 4411.00 13.96 17.13 100.0 NOP56-219 retained intron transverse colon (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 2199.00 6.96 8.54 88.96 NOP56-219 retained intron transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 83.00 1.01 0.32 35.02 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 1665.54 20.23 6.47 37.5 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 46.00 0.56 0.18 100.0 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 635.00 7.71 2.47 100.0 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 44.00 0.53 0.17 100.0 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 299.00 3.63 1.16 78.27 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 2584.49 31.39 10.04 58.18 RNA5-8SN2-201 rRNA transverse colon (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 30.00 100.00 0.12 100.0 MIR7974-201 miRNA transverse colon (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 1.00 50.00 0.00 100.0 MIR376A1-201 miRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 1014.00 2.90 3.94 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 928.98 2.66 3.61 44.96 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 5.00 0.01 0.02 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 3.00 0.01 0.01 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 45.00 0.13 0.17 39.13 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 45.00 0.13 0.17 95.74 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 934.78 2.67 3.63 45.25 U2.3-201 snRNA transverse colon (Tissue)