ENCFF379KTQ

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR003SZJ
Description: Part of ENCODE experiment ENCSR003SZJ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 1052.00 3.09 4.76 100.0 SNORD101-201 snoRNA stomach (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 31154.00 91.46 140.94 99.94 SNORD101-201 snoRNA stomach (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 148.00 0.43 0.67 100.0 SNORD101-201 snoRNA stomach (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 30505.00 96.95 138.00 100.0 SNORD37-201 snoRNA stomach (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 19070.00 95.13 86.27 100.0 SNORD59A-201 snoRNA stomach (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 227.00 43.91 1.03 100.0 SNORA7B-201 snoRNA stomach (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 99.00 18.75 0.45 100.0 Y_RNA.555-201 misc RNA stomach (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 15170.00 93.13 68.63 94.42 MIR25-201 miRNA stomach (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 10209.00 88.01 46.18 95.07 MIR99B-201 miRNA stomach (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 5898.00 47.90 26.68 88.12 MIR23B-201 miRNA stomach (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 5826.00 47.31 26.36 78.35 MIR23B-201 miRNA stomach (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 2676.00 76.13 12.11 100.0 MIR203A-201 miRNA stomach (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 6055.00 82.21 27.39 90.09 MIR199B-201 miRNA stomach (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 376.00 5.11 1.70 100.0 MIR199B-201 miRNA stomach (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 3686.00 93.13 16.67 100.0 MIR30B-201 miRNA stomach (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 697.00 94.83 3.15 100.0 MIR181D-201 miRNA stomach (Tissue)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 5.00 100.00 0.02 100.0 MIR508-201 miRNA stomach (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 367.00 81.56 1.66 100.0 MIR215-201 miRNA stomach (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 529.00 0.57 2.39 100.0 MIR181A2-201 miRNA stomach (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 50007.00 97.56 226.23 98.69 MIR191-201 miRNA stomach (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 50.00 80.65 0.23 89.29 MIR149-201 miRNA stomach (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1349.00 90.72 6.10 99.56 MIR181C-201 miRNA stomach (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 79.00 5.31 0.36 100.0 MIR181C-201 miRNA stomach (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 1709.00 62.24 7.73 100.0 MIR194-1-201 miRNA stomach (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 272.00 74.73 1.23 78.39 MIR128-2-201 miRNA stomach (Tissue)