ENCFF379KTQ

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR003SZJ
Description: Part of ENCODE experiment ENCSR003SZJ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 1097.00 70.41 4.96 80.48 MIR99A-201 miRNA stomach (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 2472.00 1.39 11.18 100.0 MIR28-201 miRNA stomach (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 158334.00 88.85 716.28 92.16 MIR28-201 miRNA stomach (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1327.00 0.74 6.00 84.31 MIR28-201 miRNA stomach (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 795.00 66.64 3.60 100.0 MIR183-201 miRNA stomach (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 31755.00 89.61 143.66 100.0 MIR145-201 miRNA stomach (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 801.00 2.26 3.62 100.0 MIR145-201 miRNA stomach (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 8588.00 96.61 38.85 98.22 MIR186-201 miRNA stomach (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 3829.00 73.73 17.32 100.0 MIR200B-201 miRNA stomach (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 84.00 48.84 0.38 100.0 MIR218-1-201 miRNA stomach (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 5606.00 87.59 25.36 94.14 MIR181B2-201 miRNA stomach (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 5.00 31.25 0.02 100.0 MIR495-201 miRNA stomach (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 958500.00 89.24 4336.13 89.88 MIR10B-201 miRNA stomach (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 596.76 59.86 2.70 66.16 MIR130B-201 miRNA stomach (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 53.00 5.32 0.24 100.0 MIR130B-201 miRNA stomach (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 156.14 15.66 0.71 34.02 MIR130B-201 miRNA stomach (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 2633.00 27.09 11.91 100.0 MIR199A1-201 miRNA stomach (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 18.00 75.00 0.08 100.0 MIR487B-201 miRNA stomach (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 891.61 67.04 4.03 70.32 MIR93-201 miRNA stomach (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 324.51 24.40 1.47 29.37 MIR93-201 miRNA stomach (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 2214.00 75.46 10.02 80.13 MIR532-201 miRNA stomach (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 126.00 75.45 0.57 100.0 MIR15B-201 miRNA stomach (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 1257.00 82.59 5.69 100.0 MIR150-201 miRNA stomach (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 24.00 66.67 0.11 100.0 MIR542-201 miRNA stomach (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 280.00 77.56 1.27 100.0 MIR500A-201 miRNA stomach (Tissue)