ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 1.00 0.01 0.01 100.0 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 8.00 0.05 0.05 100.0 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 5220.00 30.16 33.51 67.3 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 99.00 0.57 0.64 100.0 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 6491.00 37.51 41.67 58.48 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 21.00 0.68 0.13 100.0 MIRLET7A1HG-203 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 613.00 5.91 3.94 100.0 SNHG29-232 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 7.00 0.07 0.04 100.0 SNHG29-232 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 558.00 5.38 3.58 100.0 SNHG29-232 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 1860.00 17.92 11.94 100.0 SNHG29-232 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 47.00 0.45 0.30 100.0 SNHG29-232 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 16.00 0.15 0.10 100.0 SNHG29-232 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 5.00 0.04 0.03 100.0 SNHG14-234 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 1008.00 7.13 6.47 100.0 SNHG14-234 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 1.00 0.01 0.01 100.0 SNHG14-234 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 3.00 0.02 0.02 100.0 SNHG14-234 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 27.00 1.07 0.17 100.0 ENST00000655317 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 9.00 0.36 0.06 100.0 ENST00000655317 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 501.00 4.90 3.22 53.99 LINC01962-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 3478.00 34.05 22.33 100.0 LINC01962-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 823.00 8.06 5.28 100.0 LINC01962-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 1.00 20.00 0.01 100.0 MEG8-228 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 3.00 0.07 0.02 100.0 SNHG14-261 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 7.00 0.35 0.04 100.0 LIMD1-AS1-204 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 41.00 2.03 0.26 87.23 LIMD1-AS1-204 lncRNA trophoblast cell (In vitro differentiated cells)