ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 463.00 43.84 2.97 94.88 MIR99AHG-262 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 468.00 44.32 3.00 100.0 MIR99AHG-262 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 1827.00 4.14 11.73 100.0 MIR9-2HG-225 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 39095.00 88.49 250.98 97.13 MIR9-2HG-225 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 5.00 55.56 0.03 100.0 MEG8-233 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 17.00 0.30 0.11 100.0 SNHG14-278 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 1.00 0.25 0.01 100.0 SNHG17-252 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 9.00 1.14 0.06 100.0 SNHG14-288 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 2.00 5.13 0.01 100.0 SNHG14-306 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 4.00 10.26 0.03 100.0 SNHG14-306 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 1.00 2.56 0.01 100.0 SNHG14-306 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 8.00 20.51 0.05 100.0 SNHG14-306 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 3658.00 53.49 23.48 100.0 ENST00000666735 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 1.31 0.04 0.01 32.67 SNHG14-312 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 2.79 0.08 0.02 69.68 SNHG14-312 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 4.00 40.00 0.03 100.0 MEG8-244 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 2530.00 2.21 16.24 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 29822.00 26.02 191.45 96.81 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 7.71 0.01 0.05 35.06 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 2931.00 2.56 18.82 96.54 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 14053.00 12.26 90.22 97.54 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 145.00 0.13 0.93 40.73 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 510.00 0.44 3.27 99.8 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 9455.00 8.25 60.70 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 133.00 0.12 0.85 90.48 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)