ENCFF295DXJ

Library Details

Organism: Homo Sapiens
Biosample: smooth muscle cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR250STJ
Description: Part of ENCODE experiment ENCSR250STJ. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a smooth muscle pathway. They are stranded SE101 length Hi-Seq reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 293.00 4.26 0.34 100.0 MT-TQ-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 554.00 41.16 0.65 81.59 MT-TM-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 162.00 12.04 0.19 100.0 MT-TM-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 80.00 30.42 0.09 100.0 MT-TC-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 2221.00 3.31 2.61 74.98 MT-TY-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 57673.00 85.83 67.71 100.0 MT-TY-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 205.00 0.31 0.24 100.0 MT-TY-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 552.00 0.82 0.65 100.0 MT-TY-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 3154.00 4.69 3.70 83.11 MT-TY-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 5.00 3.03 0.01 100.0 MT-TD-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 63.00 0.88 0.07 100.0 MT-TK-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 5.00 0.07 0.01 100.0 MT-TK-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 2411.00 33.76 2.83 100.0 MT-TK-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 2177.00 30.49 2.56 100.0 MT-TK-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 194.00 15.41 0.23 100.0 MT-TS2-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 98.00 7.78 0.12 100.0 MT-TS2-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 176.00 13.98 0.21 84.62 MT-TS2-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 64.00 2.42 0.08 100.0 MT-TL2-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 11.00 0.02 0.01 100.0 MT-TE-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 44618.00 62.90 52.38 79.62 MT-TE-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 288.00 0.41 0.34 100.0 MT-TE-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 1388.00 1.96 1.63 100.0 MT-TE-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 1235.00 1.74 1.45 67.05 MT-TE-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 450.00 0.63 0.53 88.41 MT-TE-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 59.00 0.08 0.07 24.69 MT-TE-201 Mt tRNA smooth muscle cell (In vitro differentiated cells)