ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 4688.00 0.34 18.46 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 810872.25 57.98 3192.99 62.22 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 793.00 0.06 3.12 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 129.00 0.01 0.51 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 541567.73 38.72 2132.54 40.11 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 11969.00 0.86 47.13 94.31 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 2836.00 0.20 11.17 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 4918.00 0.35 19.37 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 580.00 0.04 2.28 100.0 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 4487.00 0.32 17.67 98.12 SNHG5-273 lncRNA prostate gland (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 367.00 9.83 1.45 54.78 SNHG14-323 lncRNA prostate gland (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 1568.00 1.96 6.17 58.86 MEG8-251 lncRNA prostate gland (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 73083.00 91.52 287.78 98.61 MEG8-251 lncRNA prostate gland (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 1214.00 1.52 4.78 44.63 MEG8-251 lncRNA prostate gland (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 947.00 1.19 3.73 93.76 MEG8-251 lncRNA prostate gland (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 18600.00 67.68 73.24 93.67 SNHG14-336 lncRNA prostate gland (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 7523.00 27.37 29.62 53.08 SNHG14-336 lncRNA prostate gland (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 10269.00 75.46 40.44 96.65 SNHG14-341 lncRNA prostate gland (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 409.00 10.80 1.61 100.0 NCL-211 retained intron prostate gland (Tissue)
ENST00000677786.1 ENST00000677786.1_3513_3605_+ 3513–3605 1.00 0.57 0.00 100.0 NCL-216 retained intron prostate gland (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 263.00 34.83 1.04 100.0 FMN2-209 protein coding CDS not defined prostate gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 33.00 0.08 0.13 100.0 LINC02739-203 lncRNA prostate gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 189.00 0.43 0.74 54.47 LINC02739-203 lncRNA prostate gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 177.00 0.40 0.70 100.0 LINC02739-203 lncRNA prostate gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 2796.00 6.39 11.01 100.0 LINC02739-203 lncRNA prostate gland (Tissue)