ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 205.00 0.03 0.81 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1399.00 0.19 5.51 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 28.00 0.00 0.11 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 430.00 0.06 1.69 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 842.00 0.11 3.32 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 14813.00 1.99 58.33 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 269.00 0.04 1.06 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 2403.00 0.32 9.46 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 36914.00 4.95 145.36 76.28 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 6.00 0.00 0.02 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 147220.00 19.76 579.71 99.29 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 41.00 0.01 0.16 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 28.00 0.00 0.11 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 7817.00 1.05 30.78 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 3450.00 0.46 13.59 83.51 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 865.36 0.12 3.41 37.53 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 1378.00 0.18 5.43 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 3219.00 0.43 12.68 67.8 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1547.00 0.21 6.09 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 66.00 0.01 0.26 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 21.00 0.00 0.08 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 10514.00 18.11 41.40 100.0 SNHG14-315 lncRNA prostate gland (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 24767.00 42.66 97.53 90.75 SNHG14-315 lncRNA prostate gland (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 10300.00 17.74 40.56 80.95 SNHG14-315 lncRNA prostate gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 10.00 0.00 0.04 100.0 SNHG5-273 lncRNA prostate gland (Tissue)