ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 2764.00 0.38 10.88 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 13396.00 1.84 52.75 85.19 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 11128.00 1.53 43.82 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 2825.00 0.39 11.12 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 2070.00 0.28 8.15 86.9 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 16852.00 2.32 66.36 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 424.00 0.06 1.67 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 1120.00 0.15 4.41 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 224724.00 30.89 884.90 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 67.00 0.01 0.26 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 126.00 11.81 0.50 100.0 FTX-219 lncRNA prostate gland (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 494.00 46.30 1.95 91.48 FTX-219 lncRNA prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 166.00 1.31 0.65 31.44 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 221.00 1.74 0.87 47.73 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 4406.00 34.74 17.35 86.92 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 362.00 2.85 1.43 68.56 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 2441.00 19.25 9.61 65.5 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 132.00 1.04 0.52 100.0 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 279.00 2.20 1.10 100.0 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 358.00 2.82 1.41 100.0 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 376.00 1.10 1.48 67.5 ENST00000651540 lncRNA prostate gland (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 1453.00 4.24 5.72 95.34 ENST00000651540 lncRNA prostate gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 68.00 0.20 0.27 100.0 ENST00000651540 lncRNA prostate gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1072.00 3.13 4.22 52.32 ENST00000651540 lncRNA prostate gland (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 52.00 0.15 0.20 100.0 ENST00000651540 lncRNA prostate gland (Tissue)