ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 7338.00 14.66 28.90 100.0 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 4170.00 8.33 16.42 88.78 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 582.00 1.16 2.29 100.0 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 1191.00 2.38 4.69 51.07 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 1178.00 2.35 4.64 82.26 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 788.00 1.57 3.10 69.86 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 11277.31 5.45 44.41 38.04 5S_rRNA.20-201 rRNA pseudogene prostate gland (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 147.00 3.69 0.58 100.0 HSPA9-211 retained intron prostate gland (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1061.00 26.60 4.18 54.05 HSPA9-211 retained intron prostate gland (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 6133.00 84.76 24.15 100.0 DNM3OS-205 lncRNA prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 4084.00 0.56 16.08 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 3658.00 0.50 14.40 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 245.00 0.03 0.96 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 177.00 0.02 0.70 80.45 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 1632.00 0.22 6.43 86.12 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 31.00 0.00 0.12 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 883.00 0.12 3.48 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 312.00 0.04 1.23 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 416712.00 57.28 1640.90 99.86 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 720.00 0.10 2.84 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 860.00 0.12 3.39 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 476.00 0.07 1.87 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 3481.00 0.48 13.71 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 3.00 0.00 0.01 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 426.00 0.06 1.68 100.0 GAS5-230 retained intron prostate gland (Tissue)