ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 222.00 0.09 0.87 100.0 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 150284.00 63.46 591.78 99.24 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 1152.00 0.49 4.54 100.0 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 2502.00 1.06 9.85 48.59 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 1543.00 0.65 6.08 100.0 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 111.00 0.05 0.44 100.0 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 14897.00 98.22 58.66 100.0 RPS8-207 protein coding CDS not defined prostate gland (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 122.00 14.14 0.48 100.0 RPL7A-206 protein coding CDS not defined prostate gland (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 107.00 12.40 0.42 100.0 RPL7A-206 protein coding CDS not defined prostate gland (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 316.00 36.62 1.24 100.0 RPL7A-206 protein coding CDS not defined prostate gland (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 176837.00 49.84 696.33 99.62 RPL21-209 retained intron prostate gland (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 4855.00 1.37 19.12 100.0 RPL21-209 retained intron prostate gland (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 168768.00 47.57 664.56 95.99 RPL21-209 retained intron prostate gland (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 1.00 0.00 0.00 100.0 RPL21-209 retained intron prostate gland (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 598.00 0.17 2.35 100.0 RPL21-209 retained intron prostate gland (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 56.00 30.43 0.22 100.0 GABRE-209 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 17370.00 32.56 68.40 63.49 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 18626.00 34.91 73.34 99.56 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 94.00 0.18 0.37 100.0 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 346.00 0.65 1.36 100.0 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 59.00 0.11 0.23 100.0 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 62.00 0.12 0.24 100.0 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_1364_1441_+ 1364–1441 221.00 0.41 0.87 86.33 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 227.00 3.55 0.89 100.0 RPL7A-207 protein coding CDS not defined prostate gland (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 1936.00 30.25 7.62 100.0 RPL7A-207 protein coding CDS not defined prostate gland (Tissue)