ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 16.00 0.01 0.08 3.09 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 96911.00 83.72 472.18 95.79 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 4535.71 37.20 22.10 56.44 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 5278.32 43.29 25.72 56.8 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 943.00 7.73 4.59 94.68 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 468250.00 98.10 2281.47 99.57 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 706.00 11.99 3.44 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 4891.00 30.00 23.83 65.41 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 39.00 0.02 0.19 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 257.00 0.02 1.25 81.07 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 14688.00 90.12 71.56 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 255.00 3.74 1.24 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 233614.00 98.43 1138.24 99.78 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 269.00 0.24 1.31 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 97372.00 85.36 474.43 95.96 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 73.00 28.97 0.36 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 603.00 21.23 2.94 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 145.00 12.09 0.71 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 68326.00 99.03 332.91 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 1432.00 97.22 6.98 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 25754.00 51.07 125.48 86.62 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 148.00 0.29 0.72 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 21.00 0.01 0.10 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 1280.00 36.07 6.24 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 318.00 5.26 1.55 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA stomach (Tissue)