ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 548.00 9.68 2.67 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 135.00 2.38 0.66 56.96 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 248.00 0.01 1.21 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 3747.00 65.61 18.26 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 7.00 1.34 0.03 50.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 7.00 1.34 0.03 50.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 696.00 9.27 3.39 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 35.00 0.47 0.17 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 29795.00 95.67 145.17 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 655.00 70.43 3.19 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 739.00 57.82 3.60 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 699.00 1.27 3.41 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 1903.00 3.47 9.27 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 190.00 0.35 0.93 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 1632.00 2.97 7.95 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 137.00 0.25 0.67 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 177.00 0.32 0.86 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 1474.00 0.05 7.18 74.75 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 1466.00 0.05 7.14 62.41 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 10256.00 0.36 49.97 95.23 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 26307.00 61.17 128.18 89.88 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 8824.00 97.48 42.99 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 656.00 38.84 3.20 90.48 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 463.00 95.86 2.26 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 502.00 0.43 2.45 96.91 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA stomach (Tissue)