ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 211.00 5.44 1.03 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 936.00 28.85 4.56 62.61 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 53.00 0.02 0.26 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 20.00 44.44 0.10 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 8777.00 20.41 42.76 86.1 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 124.00 0.29 0.60 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 442.00 1.03 2.15 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 241.00 12.12 1.17 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 265.00 0.02 1.29 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 6742.00 0.50 32.85 86.19 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 204.00 0.02 0.99 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 1464.00 0.11 7.13 93.67 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 239741.00 17.71 1168.10 45.63 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 15.00 0.00 0.07 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 99.00 0.01 0.48 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 1186.00 80.14 5.78 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 118.00 0.00 0.57 92.19 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 1050.00 29.46 5.12 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 800.00 22.45 3.90 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 593.00 14.56 2.89 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 298.00 2.07 1.45 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 10.00 0.00 0.05 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 651.00 0.02 3.17 12.78 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 4112.00 41.73 20.04 67.4 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 3076.00 31.22 14.99 42.79 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA stomach (Tissue)