ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 231.00 4.58 1.13 81.34 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 342.01 6.77 1.67 39.54 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 678.95 13.44 3.31 76.37 ENST00000823801 lncRNA stomach (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 2617.00 52.65 12.75 63.32 ENST00000827714 lncRNA stomach (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 1516.00 30.50 7.39 36.68 ENST00000827714 lncRNA stomach (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 338.00 2.38 1.65 100.0 GAS5-377 lncRNA stomach (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 11.00 0.08 0.05 100.0 GAS5-377 lncRNA stomach (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1254.00 8.83 6.11 100.0 GAS5-377 lncRNA stomach (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 12021.00 84.60 58.57 100.0 GAS5-377 lncRNA stomach (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 1.00 14.29 0.00 100.0 MIR205HG-245 lncRNA stomach (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 4.00 0.14 0.02 100.0 ZFAS1-238 lncRNA stomach (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 29.00 1.04 0.14 100.0 ZFAS1-238 lncRNA stomach (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 22.00 0.79 0.11 100.0 ZFAS1-238 lncRNA stomach (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1229.00 44.13 5.99 100.0 ZFAS1-238 lncRNA stomach (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 4806.00 91.21 23.42 100.0 ZFAS1-242 lncRNA stomach (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 304.00 21.42 1.48 100.0 ENST00000837997 lncRNA stomach (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 586.00 41.30 2.86 100.0 ENST00000837997 lncRNA stomach (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 6034.00 76.52 29.40 82.45 ENST00000839036 lncRNA stomach (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 37.00 10.91 0.18 100.0 ENST00000849527 lncRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 164900.00 95.22 803.45 99.02 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 16.00 0.01 0.08 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 72.00 0.03 0.35 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 787.00 47.75 3.83 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 585.00 35.50 2.85 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 382.00 17.36 1.86 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA stomach (Tissue)