ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 2471.00 89.21 12.04 100.0 SCARNA5-201 scaRNA stomach (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 4813.00 1.99 23.45 63.06 RNY4-201 misc RNA stomach (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 310.00 0.13 1.51 100.0 RNY4-201 misc RNA stomach (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 347.00 0.14 1.69 100.0 RNY4-201 misc RNA stomach (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 1477.00 0.61 7.20 100.0 RNY4-201 misc RNA stomach (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 87062.00 36.06 424.19 99.0 RNY4-201 misc RNA stomach (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 115990.00 48.04 565.14 99.7 RNY4-201 misc RNA stomach (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 5341.00 2.21 26.02 85.85 RNY4-201 misc RNA stomach (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1698.00 0.70 8.27 82.07 RNY4-201 misc RNA stomach (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 3196.00 1.32 15.57 100.0 RNY4-201 misc RNA stomach (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 216.00 0.09 1.05 46.96 RNY4-201 misc RNA stomach (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 108.00 0.04 0.53 100.0 RNY4-201 misc RNA stomach (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1505.00 80.05 7.33 87.2 MIR3142HG-201 lncRNA stomach (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 33998.00 79.36 165.65 88.75 MIR151A-201 miRNA stomach (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 3867.00 9.03 18.84 100.0 MIR151A-201 miRNA stomach (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1678.00 99.29 8.18 100.0 DENND3-221 protein coding stomach (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 2951.00 22.89 14.38 75.57 WDR74-204 protein coding stomach (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 247.00 1.92 1.20 100.0 WDR74-204 protein coding stomach (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 246.00 1.91 1.20 100.0 WDR74-204 protein coding stomach (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 698.00 5.41 3.40 100.0 WDR74-204 protein coding stomach (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 357.00 2.77 1.74 72.27 WDR74-204 protein coding stomach (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 137.00 1.06 0.67 27.73 WDR74-204 protein coding stomach (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 141.00 21.33 0.69 100.0 SCARNA9-201 lncRNA stomach (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 35027.00 96.58 170.66 100.0 TAF1D-215 retained intron stomach (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 962562.00 78.10 4689.92 79.62 ENST00000548801 lncRNA stomach (Tissue)