ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 6207.00 3.58 30.24 100.0 MT-TE-201 Mt tRNA stomach (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 567.00 0.33 2.76 100.0 MT-TE-201 Mt tRNA stomach (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 2.00 50.00 0.01 100.0 MIR196A1-201 miRNA stomach (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 990.00 28.03 4.82 100.0 MT-RNR1-201 Mt rRNA stomach (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 198.00 78.26 0.96 100.0 MIR454-201 miRNA stomach (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 125.00 45.62 0.61 100.0 MIR501-201 miRNA stomach (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 1043.00 92.14 5.08 100.0 MIR769-201 miRNA stomach (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 106.00 83.46 0.52 100.0 KRTAP19-1-201 protein coding stomach (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 7.00 28.00 0.03 100.0 MIR708-201 miRNA stomach (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 8.00 61.54 0.04 100.0 MIR543-201 miRNA stomach (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 10.00 100.00 0.05 100.0 MIR301B-201 miRNA stomach (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 195.00 49.74 0.95 79.59 RNU1-82P-201 snRNA stomach (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 166.00 1.67 0.81 100.0 SNORD66-201 snoRNA stomach (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 518.00 5.20 2.52 100.0 SNORD66-201 snoRNA stomach (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 3518.00 35.34 17.14 69.46 SNORD66-201 snoRNA stomach (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 32.00 24.62 0.16 100.0 U3.17-201 snoRNA stomach (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 2165.00 93.40 10.55 100.0 SNORD17-201 snoRNA stomach (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 129.00 74.14 0.63 100.0 SNORD72-201 snoRNA stomach (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 1197.00 74.53 5.83 100.0 SNORD70B-201 snoRNA stomach (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 4668.00 67.18 22.74 94.06 RNY4P18-201 misc RNA stomach (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 36008.00 76.85 175.44 100.0 SNORD69-201 snoRNA stomach (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 3220.00 6.87 15.69 100.0 SNORD69-201 snoRNA stomach (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 3454.00 7.37 16.83 100.0 SNORD69-201 snoRNA stomach (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 581.00 1.24 2.83 100.0 SNORD69-201 snoRNA stomach (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 11005.00 80.95 53.62 88.91 B4GALNT2-202 protein coding stomach (Tissue)