ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 271.00 1.19 1.18 91.86 LINC01962-202 lncRNA body of pancreas (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 5739.00 25.26 24.91 100.0 LINC01962-202 lncRNA body of pancreas (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 2277.00 10.02 9.88 100.0 LINC01962-202 lncRNA body of pancreas (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 5056.00 44.83 21.95 86.41 SNHG14-241 lncRNA body of pancreas (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 10574.00 91.89 45.90 100.0 MEG8-228 lncRNA body of pancreas (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 307.00 7.85 1.33 100.0 SNHG14-254 lncRNA body of pancreas (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 380.00 5.03 1.65 100.0 SNHG14-261 lncRNA body of pancreas (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 2859.00 37.82 12.41 80.38 SNHG14-261 lncRNA body of pancreas (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 30.00 0.19 0.13 100.0 LIMD1-AS1-204 lncRNA body of pancreas (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 1133.00 7.31 4.92 100.0 LIMD1-AS1-204 lncRNA body of pancreas (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 4515.00 29.14 19.60 95.13 LIMD1-AS1-204 lncRNA body of pancreas (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 4625.00 62.00 20.08 80.32 MIR99AHG-262 lncRNA body of pancreas (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 911.00 12.21 3.95 100.0 MIR99AHG-262 lncRNA body of pancreas (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 119.00 56.13 0.52 100.0 SNHG14-270 lncRNA body of pancreas (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 86.00 2.20 0.37 100.0 SNHG14-275 lncRNA body of pancreas (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 101.00 21.44 0.44 100.0 MIR9-2HG-225 lncRNA body of pancreas (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 3248.00 48.75 14.10 100.0 MEG8-233 lncRNA body of pancreas (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 84.00 1.26 0.36 100.0 MEG8-233 lncRNA body of pancreas (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 306.00 15.41 1.33 100.0 SNHG14-278 lncRNA body of pancreas (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 175.00 8.81 0.76 99.43 SNHG14-278 lncRNA body of pancreas (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 1996.00 42.69 8.66 100.0 MEG8-234 lncRNA body of pancreas (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 306.00 6.54 1.33 100.0 MEG8-234 lncRNA body of pancreas (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 15765.00 96.19 68.43 100.0 SNHG17-252 lncRNA body of pancreas (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 1916.00 6.32 8.32 48.56 SNHG14-288 lncRNA body of pancreas (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 26440.00 87.25 114.77 97.21 SNHG14-288 lncRNA body of pancreas (Tissue)