ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 84.00 0.23 0.36 100.0 ENST00000651540 lncRNA body of pancreas (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 82.00 0.22 0.36 100.0 ENST00000651540 lncRNA body of pancreas (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 113.00 0.30 0.49 100.0 ENST00000651540 lncRNA body of pancreas (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 63.00 0.17 0.27 100.0 ENST00000651540 lncRNA body of pancreas (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 81.00 0.22 0.35 100.0 ENST00000651540 lncRNA body of pancreas (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 3117.00 8.35 13.53 49.82 ENST00000651540 lncRNA body of pancreas (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 9976.00 26.73 43.30 79.07 ENST00000651540 lncRNA body of pancreas (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 2933.00 0.92 12.73 100.0 MIRLET7A1HG-203 lncRNA body of pancreas (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 1207.00 85.24 5.24 100.0 MEG8-225 lncRNA body of pancreas (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 212063.00 94.87 920.52 100.0 SNHG29-232 lncRNA body of pancreas (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 778.00 0.35 3.38 100.0 SNHG29-232 lncRNA body of pancreas (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 2313.00 1.03 10.04 100.0 SNHG29-232 lncRNA body of pancreas (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 50.00 0.02 0.22 100.0 SNHG29-232 lncRNA body of pancreas (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 1186.00 0.53 5.15 100.0 SNHG29-232 lncRNA body of pancreas (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 3659.00 1.64 15.88 100.0 SNHG29-232 lncRNA body of pancreas (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 613.00 2.57 2.66 100.0 SNHG14-234 lncRNA body of pancreas (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 4873.00 20.40 21.15 81.16 SNHG14-234 lncRNA body of pancreas (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 1390.00 5.82 6.03 100.0 SNHG14-234 lncRNA body of pancreas (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 186.00 0.78 0.81 100.0 SNHG14-234 lncRNA body of pancreas (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 1404.00 5.88 6.09 100.0 SNHG14-234 lncRNA body of pancreas (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 361.00 1.51 1.57 100.0 SNHG14-234 lncRNA body of pancreas (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 2401.00 8.97 10.42 29.77 ENST00000655317 lncRNA body of pancreas (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 725.00 2.71 3.15 100.0 ENST00000655317 lncRNA body of pancreas (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 9475.00 35.40 41.13 69.89 ENST00000655317 lncRNA body of pancreas (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 2840.00 10.61 12.33 100.0 ENST00000655317 lncRNA body of pancreas (Tissue)