ENCFF225QQQ

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 434.00 0.17 1.96 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 3502.00 1.33 15.81 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 9126.00 3.47 41.20 72.1 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 50659.00 19.28 228.69 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 81.00 0.03 0.37 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 118.00 0.04 0.53 99.16 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 1669.00 0.64 7.53 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 1407.00 0.54 6.35 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 708.00 0.27 3.20 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 364.00 0.14 1.64 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 2.00 0.00 0.01 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1609.00 12.55 7.26 100.0 FTX-219 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 7611.00 59.35 34.36 92.7 FTX-219 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 46.00 0.37 0.21 86.79 CTC1-214 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 55.00 0.45 0.25 18.58 CTC1-214 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 742.00 6.00 3.35 46.26 CTC1-214 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 7.00 0.06 0.03 13.21 CTC1-214 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 2541.00 20.56 11.47 92.43 CTC1-214 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 4.00 0.03 0.02 100.0 CTC1-214 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 125.00 1.01 0.56 100.0 CTC1-214 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 1453.00 11.76 6.56 100.0 CTC1-214 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 25.00 0.38 0.11 54.35 ENST00000651540 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 81.00 1.22 0.37 100.0 ENST00000651540 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 3.00 0.05 0.01 100.0 ENST00000651540 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 559.00 8.39 2.52 82.45 ENST00000651540 lncRNA mesenchymal stem cell (In vitro differentiated cells)