ENCFF225QQQ

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 85.00 3.11 0.38 97.7 SNHG14-224 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 6.00 0.22 0.03 100.0 SNHG14-224 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 1.00 0.04 0.00 100.0 SNHG14-224 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 194.00 7.10 0.88 100.0 SNHG14-224 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 8.00 0.29 0.04 61.54 SNHG14-224 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 59.00 2.16 0.27 83.1 SNHG14-224 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 40.00 1.46 0.18 51.95 SNHG14-224 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 1025.88 20.32 4.63 70.7 5S_rRNA.20-201 rRNA pseudogene mesenchymal stem cell (In vitro differentiated cells)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 23.00 2.45 0.10 100.0 HSPA9-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 84.00 8.96 0.38 84.0 HSPA9-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 80464.00 80.72 363.24 100.0 DNM3OS-205 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 127.00 0.05 0.57 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 282.00 0.11 1.27 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 6.00 0.00 0.03 35.29 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 4313.00 1.64 19.47 98.27 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 3511.00 1.34 15.85 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 28.00 0.01 0.13 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 849.00 0.32 3.83 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 55843.00 21.25 252.09 99.9 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 5514.00 2.10 24.89 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 29823.00 11.35 134.63 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 15345.00 5.84 69.27 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 5733.00 2.18 25.88 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 35172.00 13.38 158.78 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 1934.00 0.74 8.73 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)