ENCFF225QQQ

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 56.00 0.07 0.25 15.47 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 2827.00 3.46 12.76 100.0 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 281.00 0.34 1.27 18.21 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 2147.00 2.62 9.69 67.56 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 190.00 0.23 0.86 85.97 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 8700.00 10.64 39.27 84.97 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 6321.00 7.73 28.54 68.91 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 18.00 0.02 0.08 100.0 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 35685.00 43.63 161.09 99.29 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 72.00 0.09 0.33 100.0 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 9248.00 11.31 41.75 90.05 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 235.00 47.28 1.06 100.0 RPS8-207 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 2182.00 50.08 9.85 100.0 RPL7A-206 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 5.00 0.11 0.02 100.0 RPL7A-206 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 1077.00 24.72 4.86 100.0 RPL7A-206 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 3596.00 20.18 16.23 100.0 RPL21-209 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 6866.00 38.54 31.00 97.53 RPL21-209 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 565.00 3.17 2.55 100.0 RPL21-209 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 2089.00 11.73 9.43 99.29 RPL21-209 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 1554.00 8.72 7.02 100.0 RPL21-209 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 1515.00 48.10 6.84 100.0 GABRE-209 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 4.00 0.05 0.02 100.0 RPL13A-212 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_1364_1441_+ 1364–1441 1.00 0.01 0.00 33.33 RPL13A-212 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 2023.00 26.53 9.13 99.17 RPL13A-212 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 8.00 0.10 0.04 100.0 RPL13A-212 retained intron mesenchymal stem cell (In vitro differentiated cells)