ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1501.00 3.06 7.33 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 518.00 1.06 2.53 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 2045.23 4.18 9.99 28.27 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 154.00 0.31 0.75 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 815.79 1.67 3.98 67.48 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 210.00 0.43 1.03 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 185.00 0.38 0.90 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 810.31 1.65 3.96 58.38 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 1576.00 64.46 7.70 100.0 SNORD114-9-201 snoRNA transverse colon (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 548.00 22.41 2.68 100.0 SNORD114-9-201 snoRNA transverse colon (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 2635.00 11.18 12.87 100.0 Y_RNA.234-201 misc RNA transverse colon (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 229.00 0.56 1.12 100.0 RNA5S9-201 rRNA transverse colon (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 2.00 50.00 0.01 100.0 SNORD115-23-201 snoRNA transverse colon (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 58.00 3.42 0.28 100.0 RNA5SP141-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 130.00 59.36 0.63 100.0 SNORD114-15-201 snoRNA transverse colon (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 77.00 46.67 0.38 100.0 ENST00000364722 snoRNA transverse colon (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 12.00 36.36 0.06 100.0 SNORD115-15-201 snoRNA transverse colon (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 201.00 61.09 0.98 100.0 SNORD113-3-201 snoRNA transverse colon (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 2070.00 70.07 10.11 100.0 SNORD52-201 snoRNA transverse colon (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 150.00 44.51 0.73 75.76 SNORD117-201 snoRNA transverse colon (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 48.00 14.24 0.23 29.27 SNORD117-201 snoRNA transverse colon (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 12.00 0.95 0.06 100.0 SNORD114-3-201 snoRNA transverse colon (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 138.00 10.88 0.67 100.0 SNORD114-3-201 snoRNA transverse colon (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 974.00 76.81 4.76 94.84 SNORD114-3-201 snoRNA transverse colon (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 29.00 4.87 0.14 100.0 RNA5SP298-201 rRNA pseudogene transverse colon (Tissue)