ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 760.00 23.17 3.71 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 320199.00 97.46 1563.69 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 7430.00 85.42 36.28 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 3594.00 16.42 17.55 87.83 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 151.00 0.69 0.74 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 7.00 0.00 0.03 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 3019.00 54.68 14.74 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 107.00 0.41 0.52 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 10.00 0.78 0.05 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 151.00 11.80 0.74 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 207.00 16.17 1.01 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 2.00 2.99 0.01 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA transverse colon (Tissue)