ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 2.00 0.00 0.01 100.0 SNHG12-223 lncRNA transverse colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 20517.00 45.51 100.19 92.45 SNHG12-223 lncRNA transverse colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 24035.00 53.31 117.37 98.69 SNHG12-223 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 4448.00 0.81 21.72 100.0 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 511207.00 93.27 2496.47 95.53 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 101.00 0.02 0.49 100.0 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 56.81 0.01 0.28 40.0 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 112.09 0.02 0.55 54.68 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 107.24 0.02 0.52 37.9 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 4299.00 0.78 20.99 90.01 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 99.00 0.02 0.48 100.0 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 1.00 1.19 0.00 100.0 ENST00000778783 lncRNA transverse colon (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 549.00 83.18 2.68 87.84 MIR155HG-205 lncRNA transverse colon (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 26.00 86.67 0.13 100.0 ENST00000784740 lncRNA transverse colon (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 103.00 1.98 0.50 70.55 ENST00000786284 lncRNA transverse colon (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1006.00 19.36 4.91 100.0 ENST00000786284 lncRNA transverse colon (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 43.00 0.83 0.21 39.45 ENST00000786284 lncRNA transverse colon (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 32.00 0.71 0.16 84.21 ENST00000788343 lncRNA transverse colon (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 862.59 1.20 4.21 42.43 ENST00000797550 lncRNA transverse colon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 759.91 1.06 3.71 37.38 ENST00000797550 lncRNA transverse colon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 58156.00 81.03 284.00 92.92 ENST00000797550 lncRNA transverse colon (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 47789.00 86.20 233.38 94.21 MIR181A1HG-212 lncRNA transverse colon (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 27.00 0.05 0.13 100.0 MIR181A1HG-212 lncRNA transverse colon (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 108.00 29.03 0.53 100.0 C19orf48P-218 lncRNA transverse colon (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 164.00 44.09 0.80 100.0 C19orf48P-218 lncRNA transverse colon (Tissue)