ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 1624.00 47.25 7.93 87.88 SNHG18-220 lncRNA transverse colon (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 50.00 1.01 0.24 100.0 ENST00000817026 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 327.00 1.81 1.60 99.7 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 5.00 0.03 0.02 100.0 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 156.10 0.86 0.76 48.03 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 37.26 0.21 0.18 50.35 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 3.00 0.02 0.01 100.0 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 146.80 0.81 0.72 39.78 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 45.47 0.25 0.22 22.07 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 74.00 0.41 0.36 81.32 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 2460.95 13.63 12.02 35.5 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 5769.40 31.96 28.17 81.96 ENST00000823801 lncRNA transverse colon (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 698.00 70.22 3.41 84.5 ENST00000827714 lncRNA transverse colon (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 128.00 12.88 0.63 15.5 ENST00000827714 lncRNA transverse colon (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 2264.00 11.63 11.06 100.0 GAS5-377 lncRNA transverse colon (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 11.00 0.06 0.05 100.0 GAS5-377 lncRNA transverse colon (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 692.00 3.55 3.38 100.0 GAS5-377 lncRNA transverse colon (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 15992.00 82.13 78.10 100.0 GAS5-377 lncRNA transverse colon (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 15268.00 95.09 74.56 99.72 ZFAS1-238 lncRNA transverse colon (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 15.00 0.09 0.07 100.0 ZFAS1-238 lncRNA transverse colon (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 6.00 0.04 0.03 100.0 ZFAS1-238 lncRNA transverse colon (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 306.00 1.91 1.49 100.0 ZFAS1-238 lncRNA transverse colon (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 485.00 16.42 2.37 100.0 ZFAS1-242 lncRNA transverse colon (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 2336.00 79.11 11.41 100.0 ZFAS1-242 lncRNA transverse colon (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 1907.00 53.15 9.31 100.0 ENST00000837997 lncRNA transverse colon (Tissue)